Phylogenetic landscape of Monkeypox Virus (MPV) during the early outbreak in New York City, 2022Article Published on 2023-12-012023-06-09 Journal: Emerging Microbes & Infections [Category] Fulltext, 원숭이두창, [키워드] Cell culture Genome sequencing Monkeypox virus mutations. Orthologous Poxvirus Genes (OPG) Phylogenetic analysis [DOI] 10.1080/22221751.2023.2192830 PMC 바로가기
Zoonotic fungus Arthroderma multifidum causing chronic pulmonary infectionCase Reports Published on 2023-05-012023-06-22 Journal: International Journal of Infectious Diseases [Category] 조류인플루엔자, [키워드] Arthroderma multifidum community-acquired pneumonia genome annotation Genome sequencing zoonoses. [DOI] 10.1016/j.ijid.2023.02.010 PMC 바로가기 [Article Type] Case Reports
A new and efficient enrichment method for metagenomic sequencing of Monkeypox virusArticle Published on 2023-01-172023-06-09 Journal: BMC Genomics [Category] Fulltext, 원숭이두창, [키워드] Genome sequencing Host DNA depletion Human monkeypox (hMPX) metagenomics Monkeypox virus (MPXV) viral surveillance. [DOI] 10.1186/s12864-023-09114-w PMC 바로가기
SARS-CoV-2 RNA Is Readily Detectable at Least 8 Months after Shedding in an Isolation FacilityArticle Published on 2022-12-212023-07-10 Journal: mSphere [Category] COVID19(2023년), [키워드] COVID-19 Genome sequencing relic RNA RNA SARS-CoV-2 surface samples virus. [DOI] 10.1128/msphere.00177-22 PMC 바로가기
Monitoring the Establishment of VOC Gamma in Minas Gerais, Brazil: A Retrospective Epidemiological and Genomic Surveillance StudyArticle Published on 2022-12-092023-07-11 Journal: Viruses [Category] COVID19(2023년), [키워드] Genome sequencing PCR-genotyping phylodinamics SARS-CoV-2 spread variants. [DOI] 10.3390/v14122747 PMC 바로가기
From Alpha to Omicron BA.2: New digital RT-PCR approach and challenges for SARS-CoV-2 VOC monitoring and normalization of variant dynamics in wastewaterArticle Published on 2022-11-202022-11-16 Journal: The Science of the total environment [Category] COVID19(2023년), SARS, 변종, 치료기술, [키워드] approach circulation Concentration COVID-19 COVID-19 pandemic discrimination Epidemic fecal France Genome sequencing greater human population immune response immunized incidence Local MONITOR New normalization omicron Paris pathogenicity Patient PMMoV populations prevalent proportion public health resulting risk RT-PCR SARS-CoV-2 selection of variant Sequencing Severity of infection specific mutation Spread statistically strain subject suggested the SARS-CoV-2 genome Transmissibility Vaccination strategy Variability variant variants of concern Variation viral dynamics viral spread virus VoC VOCs wastewater Wastewater. [DOI] 10.1016/j.scitotenv.2022.157740 PMC 바로가기
Transmission of SARS-CoV-2 by children to contacts in schools and households: a prospective cohort and environmental sampling study in LondonArticle Published on 2022-11-012022-11-16 Journal: The Lancet. Microbe [Category] SARS, 변종, 치료기술, [키워드] acquisition Assessing Asymptomatic children Community Contact Contamination Department eight Evidence FIVE Frequency Genome sequencing Health household contact household contacts IMPROVE incident index case Infection Innovation Laboratory Local London occur PCR testing positive positive PCR positive SARS-CoV-2 PCR Precaution Prevent prospective cohort public health pupil Pupils quantified reduced representing rising SARS-CoV-2 SARS-COV-2 infection SARS-CoV-2 RNA SARS-CoV-2 transmission School Schools secondary transmission Spread supported symptomatic individual tested Testing throat swab Transmission transmission of SARS-CoV-2 variant Ventilation viral shedding was done Weekly with COVID-19 [DOI] 10.1016/S2666-5247(22)00124-0 PMC 바로가기
Healthcare-Associated COVID-19 across Five Pandemic Waves: Prediction Models and Genomic AnalysesArticle Published on 2022-10-182022-11-16 Journal: Viruses [Category] COVID19(2023년), SARS, 유전자 메커니즘, [키워드] addition analyses Analysis benefit BMI C-reactive protein Cluster cluster analysis Control COVID-19 CRP death ECDC European Factor frailty Genome sequencing genomic Genomic analysis genomic data HAI healthcare worker healthcare-associated COVID-19 Hospital-acquired infection identify Infection management Model Negative predictive value nosocomial outbreak NPV pandemic Patient performed Positive predictive value PPV predict prediction prediction modelling. ROC SARS-CoV-2 SARS-COV-2 infection significantly thrombocyte university hospital variable [DOI] 10.3390/v14102292 PMC 바로가기
Molecular characterization and sequecing analysis of SARS-CoV-2 genome in Minas Gerais, BrazilArticle Published on 2022-10-012023-07-10 Journal: Biologicals : journal of the International Associa [Category] COVID19(2023년), [키워드] B.1 lineage COVID-19 Genome sequencing Genomic surveillance Minas Gerais SARS-CoV-2. [DOI] 10.1016/j.biologicals.2022.08.001 PMC 바로가기
Intrahost SARS-CoV-2 k-mer Identification Method (iSKIM) for Rapid Detection of Mutations of Concern Reveals Emergence of Global Mutation PatternsArticle Published on 2022-09-272022-11-15 Journal: Viruses [Category] SARS, 변종, 치료기술, [키워드] bioinformatics can be used computational genomics concern COVID-19 dataset detect detection emergence Frequency genome assembly Genome sequencing genomic genomic sequencing identification identify increases in Intrahost variation L452R Lineage lineages Mutation N501Y pattern Rapid raw data SARS-CoV-2 Sequencing spike Spread Surveillance the timing variant variants variants of concern variants of concern. Variation [DOI] 10.3390/v14102128 PMC 바로가기